Biochem 712: Sequence Analysis (lab)
Tues. 1:20-3:15, 1 cr, Fall semester of even years
BNMC Computer Lab 1240 Biotech

A.C.Palmenberg Home
Biochemistry
UW Graduate School
Inst. for Molecular Virology
UW-Madison

Course description

Graduate level, hands-on laboratory course, taught at actual computer terminals, designed to complement and reinforce the sequence analysis concepts presented in the didactic course, Biochemistry 711.

For fall 2008, 712 is NOT offered as a separate course. The lab has been merged with 711 into a single course (1 lecture and 1 lab per week) for 2 cr total.

Topics will include: database searching; pairwise and multiple sequence comparisons; alignments; profiles; pattern recognition; phylogenetic reconstruction; desktop molecular graphics; RNA folding; and other neat stuff.

Programs include: DNASTAR, RasMol, VMD, DeepView, PyMol, CLUSTAL, MEGA, BLAST, FASTA, and the GCG Wisconsin Package

ENROLLMENT LIMIT OF 16 STUDENTS

Course Materials

Current Syllabus
2008 711 not ready yet
Previous Syllabi
'02, '04, '06
Class Links
Tutorials
Files and Resources
Instructors
Ann Palmenberg
Jean-Yves Sgro
Marchel Hill

Other Materials

For Current Year
Lab Book
Lectures
Assignments
Grading Requirements
Data Sets

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Page modified 8/05/03