Palmenberg lab: sequences, plasmids, protocols
Table updated: Nov 15, 2006 |
Plasmid Seqs |
File format |
Description/Information |
| pEC9 |
txt |
plasmid cDNA encoding vEC9 CG
10889 b Seq: Oct 2006
Includes: vector and T7 promoter
|
| pMwt |
txt |
plasmid cDNA encoding vMwt CG
10961 b
Seq: Oct 2006
Includes: vector and T7 promoter
|
| Rz-pMwt |
txt |
plasmid cDNA encoding Rz-vMwt CG
10296 b
Seq: Oct 2006
Includes: vector, T7 promoter and ribozyme seq
|
| pMC0 |
txt |
plasmid cDNA encoding vMC0 CG
10906 b Seq: Oct 2006
Includes: Includes: vector and T7 promoter
|
| pF/R-wt |
txt |
plasmid pF/R-wt
8686 b
Seq: Oct 2006, For pdf map, click here
Includes: CMV promoter, T7 promoter, Fluc gene, EMCV IRES (wt), Rluc gene, 3Õ UTR, polyA site, and complete vector (derivative of CloneTech pIRES)
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txt |
plasmid pF/L
7925 b
Seq: Oct 2006, For pdf map, click here
Includes: CMV promoter, T7 promoter, Fluc gene, EMCV IRES (wt), EMCV Leader gene, 3' UTR, polyA site, and complete vector (derivative of CloneTech pIRES)
|
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txt |
plasmid pF/L-C19A
7925 b
Seq: Oct 2006
Includes: Same as pF/L except for L zinc finger mutation (C to A) at aa 19 of L seq
|
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txt |
plasmid pF/L-delta-a
7856 b
Seq: Oct 2006
Includes: Same as pF/L except with deletion within L gene acidic domain (aa: 37-61 are missing)
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Virus Seqs |
File format |
Description/Information |
| vE-R |
txt |
EMCV Rueckert strain CG
7835 b (no 3' polyA included)
Seq update: May 2006
polyC: C125UCUC3UC10
GB: NC_001479 (also: M81861)
|
| vEC9 |
txt |
EMCV C9 recomb strain CG
7722 b (including 3' polyA of 10 b) Seq: Dec 2005
polyC: C9
GB: D0288856
|
| vM-M |
txt |
Mengo M strain CG
7761 b (no 3' polyA included)
Seq: Dec 2005 (rev)
polyC: C44UC10 GB: L22089
|
| vMC0 |
txt |
Mengo M derivative recomb strain CG
7740 b (including 3' polyA of 20 b)
Seq: Dec 2005 (rev)
polyC: none
|
| vMwt |
txt |
same as Rz--vMwt
|
| Rz-vMwt |
txt |
Mengo M derivative recomb strain CG
7765 b (including 3' polyA of 10 b)
Seq: Dec 2005 (rev)
polyC: C44UC10 GB: D0294633
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Protocols |
File format |
Description/Information |
| virus & virus plasmids |
pdf |
Qiagen maxiprep for cDNAs, T7 RNA transcription, RNA transfection of HeLa cells, virus infection of HeLa cells, relevant buffers and media
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pdf |
pFR or pFL plasmid growth protocol, plasmid isolation, transfection procedures, and luciferase assays.
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